planemo
planemo.bioblend
planemo.bioc_tool_builder
planemo.bioconda_scripts
planemo.bioconda_scripts.bioconductor_skeleton
planemo.ci
planemo.cli
planemo.commands
planemo.commands.cmd_bioc_conda_recipe_init
planemo.commands.cmd_bioc_tool_init
planemo.commands.cmd_brew
planemo.commands.cmd_brew_env
planemo.commands.cmd_brew_init
planemo.commands.cmd_ci_find_repos
planemo.commands.cmd_ci_find_tools
planemo.commands.cmd_clone
planemo.commands.cmd_conda_build
planemo.commands.cmd_conda_env
planemo.commands.cmd_conda_init
planemo.commands.cmd_conda_install
planemo.commands.cmd_conda_lint
planemo.commands.cmd_conda_search
planemo.commands.cmd_config_init
planemo.commands.cmd_container_register
planemo.commands.cmd_create_gist
planemo.commands.cmd_cwl_script
planemo.commands.cmd_database_create
planemo.commands.cmd_database_delete
planemo.commands.cmd_database_list
planemo.commands.cmd_dependency_script
planemo.commands.cmd_docker_build
planemo.commands.cmd_docker_shell
planemo.commands.cmd_docs
planemo.commands.cmd_lint
planemo.commands.cmd_mull
planemo.commands.cmd_mulled_init
planemo.commands.cmd_normalize
planemo.commands.cmd_open
planemo.commands.cmd_profile_create
planemo.commands.cmd_profile_delete
planemo.commands.cmd_profile_list
planemo.commands.cmd_project_init
planemo.commands.cmd_pull_request
planemo.commands.cmd_run
planemo.commands.cmd_serve
planemo.commands.cmd_share_test
planemo.commands.cmd_shed_build
planemo.commands.cmd_shed_create
planemo.commands.cmd_shed_diff
planemo.commands.cmd_shed_download
planemo.commands.cmd_shed_init
planemo.commands.cmd_shed_lint
planemo.commands.cmd_shed_serve
planemo.commands.cmd_shed_test
planemo.commands.cmd_shed_update
planemo.commands.cmd_shed_upload
planemo.commands.cmd_syntax
planemo.commands.cmd_test
planemo.commands.cmd_test_reports
planemo.commands.cmd_tool_factory
planemo.commands.cmd_tool_init
planemo.commands.cmd_training_fill_data_library
planemo.commands.cmd_training_generate_from_wf
planemo.commands.cmd_training_init
planemo.commands.cmd_travis_before_install
planemo.commands.cmd_travis_init
planemo.commands.cmd_virtualenv
planemo.commands.cmd_workflow_convert
planemo.commands.cmd_workflow_edit
planemo.conda
planemo.conda_lint
planemo.conda_recipes
planemo.conda_verify
planemo.conda_verify.const
planemo.conda_verify.recipe
planemo.conda_verify.utils
planemo.config
planemo.cwl
planemo.cwl.run
planemo.cwl.script
planemo.cwl.toil
planemo.database
planemo.database.factory
planemo.database.interface
planemo.database.postgres
planemo.database.postgres_docker
planemo.deps
planemo.docker
planemo.engine
planemo.engine.cwltool
planemo.engine.factory
planemo.engine.galaxy
planemo.engine.interface
planemo.engine.toil
planemo.exit_codes
planemo.galaxy
planemo.galaxy.activity
planemo.galaxy.api
planemo.galaxy.config
planemo.galaxy.distro_tools
planemo.galaxy.ephemeris_sleep
planemo.galaxy.profiles
planemo.galaxy.run
planemo.galaxy.serve
planemo.galaxy.test
planemo.galaxy.test.actions
planemo.galaxy.test.structures
planemo.galaxy.workflows
planemo.git
planemo.github_util
planemo.glob
planemo.io
planemo.lint
planemo.linters
planemo.linters.biocontainer_registered
planemo.linters.conda_requirements
planemo.linters.doi
planemo.linters.urls
planemo.linters.xsd
planemo.mulled
planemo.network_util
planemo.options
planemo.reports
planemo.reports.build_report
planemo.reports.xunit_handler
planemo.rscript_parse
planemo.runnable
planemo.shed
planemo.shed.diff
planemo.shed.interface
planemo.shed2tap
planemo.shed2tap.base
planemo.shed_lint
planemo.templates
planemo.test
planemo.test.data
planemo.test.results
planemo.tool_builder
planemo.tool_lint
planemo.tools
planemo.training
planemo.training.tool_input
planemo.training.topic
planemo.training.tutorial
planemo.training.utils
planemo.virtualenv
planemo.xml
planemo.xml.diff
planemo.xml.validation
planemo_ext