planemo.shed2tap package¶
Submodules¶
planemo.shed2tap.base module¶
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class
planemo.shed2tap.base.
Actions
(actions, os=None, architecture=None, action_packages=[])[source]¶ Bases:
object
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class
planemo.shed2tap.base.
AutoconfAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'autoconf'¶
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class
planemo.shed2tap.base.
BasePackage
(dependencies, package_el, install_el, readme)[source]¶ Bases:
object
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class
planemo.shed2tap.base.
ChangeDirectoryAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'change_directory'¶
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class
planemo.shed2tap.base.
ChmodAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'chmod'¶
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class
planemo.shed2tap.base.
Dependencies
(dependencies_file, repo=None, package_factory=None)[source]¶ Bases:
object
Base class for parsing Tool Shed dependency files.
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class
planemo.shed2tap.base.
Dependency
(dependencies, package_el, repository_el)[source]¶ Bases:
object
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class
planemo.shed2tap.base.
DownloadBinary
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'download_binary'¶
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class
planemo.shed2tap.base.
DownloadByUrlAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'download_by_url'¶
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class
planemo.shed2tap.base.
DownloadFileAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'download_file'¶
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class
planemo.shed2tap.base.
MakeDirectoryAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'make_directory'¶
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class
planemo.shed2tap.base.
MakeInstallAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'make_install'¶
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class
planemo.shed2tap.base.
MoveDirectoryFilesAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'move_directory_files'¶
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class
planemo.shed2tap.base.
MoveFileAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'move_file'¶
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class
planemo.shed2tap.base.
SetEnvironmentAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'set_environment'¶
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class
planemo.shed2tap.base.
SetEnvironmentForInstallAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'set_environment_for_install'¶
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class
planemo.shed2tap.base.
SetupPerlEnvironmentAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'setup_perl_environment'¶
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class
planemo.shed2tap.base.
SetupPythonEnvironmentAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'setup_python_environment'¶
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class
planemo.shed2tap.base.
SetupREnvironmentAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'setup_r_environment'¶
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class
planemo.shed2tap.base.
SetupRubyEnvironmentAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'setup_ruby_environment'¶
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class
planemo.shed2tap.base.
SetupVirtualenvAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'setup_virtualenv'¶
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class
planemo.shed2tap.base.
ShellCommandAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'shell_command'¶
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class
planemo.shed2tap.base.
TemplateShellCommandAction
(elem)[source]¶ Bases:
planemo.shed2tap.base.BaseAction
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action_type
= 'template_command'¶
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