Python Module Index

p
 
p
planemo
    planemo.bioblend
    planemo.bioc_tool_builder
    planemo.bioconda_scripts
    planemo.bioconda_scripts.bioconductor_skeleton
    planemo.ci
    planemo.cli
    planemo.commands
    planemo.commands.cmd_bioc_conda_recipe_init
    planemo.commands.cmd_bioc_tool_init
    planemo.commands.cmd_brew
    planemo.commands.cmd_brew_env
    planemo.commands.cmd_brew_init
    planemo.commands.cmd_ci_find_repos
    planemo.commands.cmd_ci_find_tools
    planemo.commands.cmd_clone
    planemo.commands.cmd_conda_build
    planemo.commands.cmd_conda_env
    planemo.commands.cmd_conda_init
    planemo.commands.cmd_conda_install
    planemo.commands.cmd_conda_lint
    planemo.commands.cmd_conda_search
    planemo.commands.cmd_config_init
    planemo.commands.cmd_container_register
    planemo.commands.cmd_create_gist
    planemo.commands.cmd_cwl_script
    planemo.commands.cmd_database_create
    planemo.commands.cmd_database_delete
    planemo.commands.cmd_database_list
    planemo.commands.cmd_dependency_script
    planemo.commands.cmd_docker_build
    planemo.commands.cmd_docker_shell
    planemo.commands.cmd_docs
    planemo.commands.cmd_lint
    planemo.commands.cmd_mull
    planemo.commands.cmd_mulled_init
    planemo.commands.cmd_normalize
    planemo.commands.cmd_open
    planemo.commands.cmd_profile_create
    planemo.commands.cmd_profile_delete
    planemo.commands.cmd_profile_list
    planemo.commands.cmd_project_init
    planemo.commands.cmd_pull_request
    planemo.commands.cmd_run
    planemo.commands.cmd_serve
    planemo.commands.cmd_share_test
    planemo.commands.cmd_shed_build
    planemo.commands.cmd_shed_create
    planemo.commands.cmd_shed_diff
    planemo.commands.cmd_shed_download
    planemo.commands.cmd_shed_init
    planemo.commands.cmd_shed_lint
    planemo.commands.cmd_shed_serve
    planemo.commands.cmd_shed_test
    planemo.commands.cmd_shed_update
    planemo.commands.cmd_shed_upload
    planemo.commands.cmd_syntax
    planemo.commands.cmd_test
    planemo.commands.cmd_test_reports
    planemo.commands.cmd_tool_factory
    planemo.commands.cmd_tool_init
    planemo.commands.cmd_travis_before_install
    planemo.commands.cmd_travis_init
    planemo.commands.cmd_virtualenv
    planemo.conda
    planemo.conda_lint
    planemo.conda_recipes
    planemo.conda_verify
    planemo.conda_verify.const
    planemo.conda_verify.recipe
    planemo.conda_verify.utils
    planemo.config
    planemo.cwl
    planemo.cwl.run
    planemo.cwl.script
    planemo.database
    planemo.database.factory
    planemo.database.interface
    planemo.database.postgres
    planemo.docker
    planemo.engine
    planemo.engine.cwltool
    planemo.engine.factory
    planemo.engine.galaxy
    planemo.engine.interface
    planemo.exit_codes
    planemo.galaxy
    planemo.galaxy.activity
    planemo.galaxy.api
    planemo.galaxy.config
    planemo.galaxy.profiles
    planemo.galaxy.run
    planemo.galaxy.serve
    planemo.galaxy.test
    planemo.galaxy.test.actions
    planemo.galaxy.test.structures
    planemo.galaxy.workflows
    planemo.git
    planemo.github_util
    planemo.glob
    planemo.io
    planemo.lint
    planemo.linters
    planemo.linters.biocontainer_registered
    planemo.linters.conda_requirements
    planemo.linters.doi
    planemo.linters.urls
    planemo.linters.xsd
    planemo.mulled
    planemo.network_util
    planemo.options
    planemo.reports
    planemo.reports.build_report
    planemo.reports.xunit_handler
    planemo.rscript_parse
    planemo.runnable
    planemo.shed
    planemo.shed.diff
    planemo.shed.interface
    planemo.shed2tap
    planemo.shed2tap.base
    planemo.shed_lint
    planemo.templates
    planemo.test
    planemo.test.data
    planemo.test.results
    planemo.tool_builder
    planemo.tool_lint
    planemo.tools
    planemo.virtualenv
    planemo.xml
    planemo.xml.diff
    planemo.xml.validation
planemo_ext